Match details
Record ID: |
MW719067.1 |
Database: |
nt |
Go to original record |
Description: |
Hoya insularis chloroplast, partial genome. |
Taxon: |
Hoya insularis |
Original size: |
176481 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
53463 |
54017 |
+ |
555 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtaaggaa
51 acctactaag tgatgacttt caaattcaga gaaaccccgg aattaagaaa
101 aagggcaatc ctgagccaaa tcctattttc aggttgagaa aacgaaaaca
151 aggataggtg cagagactcg acggaagctg ttctaacaaa acaaatggag
201 ttggccgcgt tggtagagaa atccttccat cgaaaattaa gaaaggatga
251 aagatataca tacgtattga atactatatc aaatgattaa tgccgaccca
301 aatgagtctg tattttttct ataaaaacgg aagaattggt gtgattcgat
351 tctttcttca atgtggaatc gaatattcat tgatcaaaag attcactcca
401 tagtctgtag atcctctttt caagaactgg attaatcgga cgagaataaa
451 gatagagtcc cgttctacat gtcaatgctg gcaacaatgc aattttgagt
501 aagaggaaaa tccgtcgact taaaaaatcg tgagggttca agtccctcta
551 tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.50e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
555 |
536 |
2.50e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.