Match details
Record ID: |
MZ239204.1 |
Database: |
nt |
Go to original record |
Description: |
Stylidium petiolare chloroplast, complete genome. |
Taxon: |
Stylidium petiolare |
Original size: |
150998 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
45626 |
46221 |
+ |
596 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acttactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101 aatgggcaat cctgagccaa atcccatttt ccgaaaacaa gagttcaaaa
151 aacaaaaatc aagaaggata ggtgcagaga ctcgacggaa gctgttctaa
201 cgaatggagt tgattgtctt gcgttggtat agaatacttt ttttgaaaag
251 tctgaaaaga tgaaggataa acccataata tatatggata tgtgtacgaa
301 aatagtatat caaacgattc gacgcgagtt ttgatcggcc ttttttagat
351 aaaatttaga taaaaagggg aagaattgtt gtaaatcaat tttatattga
401 agaatgaatc tactattcat tgatcaaatc agtcaccccc gggcctgaga
451 aatcttttga agacctgata atcggacaag aatagaataa agatagagtc
501 ccattctaca tgtcaatggt ggcaacgatg aaatttatag taagaggaaa
551 atccgtcgat tttagaaatc gtgagggttc aagtccctct atcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.68e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
596 |
577 |
2.68e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.