Match details
Record ID: |
EF122473.1 |
Database: |
nt |
Go to original record |
Description: |
Oryza sativa Japonica Group clone KCS315B08 fructose-bisphosphate aldolase mRNA, complete cds. |
Taxon: |
Oryza sativa Japonica Group |
Original size: |
1494 bp |
Method: |
QT-TAX-ZM-004 |
Go to GMOMETHODS record |
Description: | Quantitative PCR method for detection of maize aldolase 1 gene. |
Target: | maize aldolase 1 |
View other 211 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
2 |
0 |
339 |
407 |
- |
69 bp |
|
1 agggaggaca ccaccctcct tgaggacatc gacgaagggc ttgccgtcct
51 tggtcttctg gtacagggt
View other 21 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerB |
100.0 |
22 bp |
0 |
0 |
69 |
48 |
2.95e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.