Match details
Record ID: |
MK988314.1 |
Database: |
nt |
Go to original record |
Description: |
Rheum nobile voucher cp20190524 chloroplast, complete genome. |
Taxon: |
Rheum nobile |
Original size: |
161707 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
49981 |
50583 |
+ |
603 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa
51 acctactaag tgagaacttt caaattcaga gaaaccctgg aattacaaaa
101 atgggcaatc ctgagccaac tccttctttc caaaaggaag aataaaaaag
151 gataggtgca gagactcaat ggaagctgtt ctaacaaatg gagttgacga
201 tcttgcgtta ttataaaaat tcttccatcg aaactccaaa aaagatgaag
251 aataaaccta tacgcagacg tacttaaata taaatactat atataataac
301 tatatattat ataaaaaaat gaaattaaaa aatattgatg acgacccgca
351 ttttttttat gactatgaaa aaatagaaga attgttgtga agcgattcca
401 agttgaagaa agagtcgaat atgcgtttaa taaattaaag catttattcc
451 ccggtctgag agatcttttg aagaaccgat ccatcggatg agaatgaaga
501 tagagtccca ttctacgtgt caatcctgac aacaatgaaa tttatagtaa
551 gaggaaaatc cgtcgacttt ataaatcgtg agggttcaag tccctctatc
601 ccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.72e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
603 |
584 |
2.72e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.