Match details
Record ID: |
JQ958270.1 |
Database: |
nt |
Go to original record |
Description: |
Cuviera acutiflora voucher Dessein et al 2809 (BR) trnT-trnL intergenic spacer, partial sequence; tRNA-Leu (trnL(UAA)) gene, complete sequence; and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Cuviera acutiflora |
Original size: |
1685 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
815 |
1355 |
+ |
541 bp |
|
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggttcagaa
151 agtgaaaaag ggataggtgc agagactcga tggaagttgt tctaacaaat
201 ggagttggct gcgttagtaa agaaatcttt ccatcgaaaa ttccgaaagg
251 ataaaacgta tacgtattga atactatatc aaatgattaa tgacgactcg
301 actgaatccg tattttttat atgaaaacgg aagaattggt gtgaatagat
351 tccacattga agaaagaatc gaataaatga ttcactccat agtctgatag
401 atcttttcaa gaattgatta atcggacgag aataaagata gagtcccgtt
451 ctacatgtca atgtcggcaa caatgaaatt tatagtaaga ggaaaatccg
501 tcgactttaa aaatcgtgag ggttcaagtc cctctatccc c
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.43e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
541 |
522 |
2.43e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.