Match details
Record ID: |
JQ958261.1 |
Database: |
nt |
Go to original record |
Description: |
Globulostylis minor voucher Dessein et al 2876 (BR) trnT-trnL intergenic spacer, partial sequence; tRNA-Leu (trnL(UAA)) gene, complete sequence; and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Globulostylis minor |
Original size: |
1712 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
832 |
1382 |
+ |
551 bp |
|
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51 cccactaagt gataactttc aaattcagag aaaccctgga attaataaaa
101 aggggcaatc ctgagccaaa tcctgttttc cgaaaccaaa ggttcagaaa
151 gtgaaaaagg gataggtgca gagactcgat ggaagttgtt ctaacaaatg
201 gagttggctg cgttagtaaa gaaatctttc catcgaaaat tccgaaagga
251 taaaacgtat acgtattgaa tactatatca aatgattaat gacgactcga
301 ctgaatccgt attttttata tgaaaacgga agaattggtg tgaatagatt
351 ccacattgaa gaaagaatcg aatattcatt gattaaatga ttcactccat
401 agtctgatag atcttttcaa gaattgatta atcggacgag aataaagata
451 gagtcccgtt ctacatgtca atgtcggcaa caatgaaatt tatagtaaga
501 ggaaaatccg tcgactttaa aaatcgtgag ggttcaagtc cctctatccc
551 c
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.48e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
551 |
532 |
2.48e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.