Match details
Record ID: |
DQ860602.1 |
Database: |
nt |
Go to original record |
Description: |
Rhododendron tomentosum tRNA-Leu (trnL) gene, intron. |
Taxon: |
Rhododendron tomentosum |
Original size: |
585 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
585 |
+ |
585 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aaaaaaaaat
101 gggcaatcct gagccaaatc cttttttcgc aaacaaacaa agattccgaa
151 agctaaaaaa agggataggt gcagagactc aatggaagct gttctaacaa
201 atggagttga ctgcgttggt agaggaatag aaatccttct atcgaaactt
251 acgaaaaaat gaaagataat tctatataca tacgtatagg cactgaaata
301 ctatataaaa tgattaataa cgaccaaaat ctgtatccct attttttttt
351 ataaaaaaaa tggaccaatt ctcgtgaatt tatttcacat tgaataaaaa
401 attgcatatt tattgatcaa atcatttact ccatcgtcta ctagatcttt
451 tgaagatctg atgaatcgga tgagaataaa gatagagtcc cattctacat
501 gtcaataccg acaacaatga aatttattgt aagaggaaaa tccgtcgact
551 ttagaaatcg tgagggttca agtccctcta tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.63e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
585 |
566 |
2.63e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.