Match details
Record ID: |
DQ860581.1 |
Database: |
nt |
Go to original record |
Description: |
Pedicularis parviflora tRNA-Leu (trnL) gene, intron. |
Taxon: |
Pedicularis parviflora |
Original size: |
557 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
557 |
+ |
557 bp |
|
1 cgaaatcggt agacgctacg gacttaattg aattgagctt tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccctgg aattaagaaa
101 aaggggcaat cctgagccaa atcttttttt tttcaaaaca aagggttaga
151 aaacgaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201 agtggagttg attacgctga tagaggaatg aaacttcaga aaagctgaaa
251 gataaacgta tctattgaat actatatcaa atgattgatt aatcatagcc
301 caaatctgta tctgtatttt tgaatacaga aaagtggaag aatttgtgtg
351 aattgattcc atattgaaga aagaatatta attcatcaaa tcattcactc
401 catagtccga tagatctttt taaaaagatt tgattaatcg gacgagaata
451 aagatagagt cccattctac atgtcaatac cggcaataat gaaattttta
501 gtaaaaggaa aatccgtcga cttttaaaat cgtgagggtt caagtccctc
551 tatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.51e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
557 |
538 |
2.51e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.