Match details
Record ID: |
DQ860568.1 |
Database: |
nt |
Go to original record |
Description: |
Kalmia procumbens tRNA-Leu (trnL) gene, intron. |
Taxon: |
Kalmia procumbens |
Original size: |
585 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
585 |
+ |
585 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gcttgagcct tggtagggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aaaaaaaaaa
101 atgggcaatc ctgacccaaa tcctgttttt tgcaaacaaa caaagattcc
151 gaaggcaaaa aaaaaaagga taggtgccga gactcaatgg aagctgttct
201 aacaaacgga gttgaatggg ttggtagagt aatagaaatc cttttctcga
251 aacttacgaa aaaatgaaag ataactctat tctatatata tatataggta
301 atgaaatact atatcattaa tatagaacaa aatatgtatc ccattttttt
351 atagcaaaaa tggaacaatt cttgtgaatt gatttcacat tgaataaaaa
401 attgcatatt tattgatcga atcatttact ccaccgtctg ctagatcttt
451 tgaagatctg atgaattgga tgagaataaa gatagagtcc cattctacat
501 gtcaataccg acaacaatga aatttattgt aagaggaaaa tccgtcgact
551 ttagaaatcg tgagggttca agtccctcta tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.63e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
585 |
566 |
2.63e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.