Match details
Record ID: |
JX275893.1 |
Database: |
nt |
Go to original record |
Description: |
Myrocarpus venezuelensis voucher J.C.Sousa-Silva 2016 (RB) tRNA-Leu (trnL) gene, intron; chloroplast. |
Taxon: |
Myrocarpus venezuelensis |
Original size: |
593 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
2 |
591 |
+ |
590 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctaccaag tgagaacttt caaattcaga gaaatcctgg aattaacaat
101 gggcaatcct gagccaaatc ctgttttccg aaaacaaaga agagtgcaga
151 aagcgagaat aaaaaaagga taggtgcaga gactcaatgg aagctgttct
201 aacaaacgga gttgacgaca tttcctttcg cgttaggaaa ggaatccttt
251 ccatcgaaat tccagaaagg aaagataaac atatatatac gtatatgtac
301 tgaaatacta tttcaattga ttaatgaaga ctcccaatct ctatttgtga
351 atatttatat cacaaatgat gtgaatcaaa tcaattccaa gttgaagaaa
401 gaatcgaata ttcattgatc aaatcattca ctccaccata gtctgataga
451 tcttttgaag aactgattaa tcagacgaga ataaagatag agtcccattc
501 tacatgtcaa taccgacaac aatgaaattt atagtaagag gaaaatccgt
551 cgattttcta aatcgtgagg gttcaagtcc ctctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.66e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
590 |
571 |
2.66e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.