Match details
Record ID: |
MW145135.1 |
Database: |
nt |
Go to original record |
Description: |
Lilium regale chloroplast, complete genome. |
Taxon: |
Lilium regale |
Original size: |
152998 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
45457 |
46061 |
+ |
605 bp |
|
1 cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51 acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101 gggcaatcct gagccaaatc tttattttga gaaaaagggt ttaatttata
151 gtttttataa tataaaacta caataaaaaa aagataggtg cagagactca
201 atggaagctg ttctaacgaa tgaagttgat tacgttgcgc tggtagccgg
251 aatccttcta tcaaaattac ggagaggatg cccgccctat atacgtatat
301 atacatactg acatagtaaa cgattgatta atcgcggccc gaatccatta
351 taatatatat agatatgaaa aatttaagag ttattgtaaa tctatattcc
401 aatcaaagtt taaggaagaa tcaaatattc agtgatcaaa ttattcattc
451 cagagtctgt atagatcttt ttaaaaactg attattcgga cgagaataaa
501 gagagagtcc cattctacgt gtcaataccg acaacaatga aatttatagt
551 aaaaggaaaa tccgtcgact ttataagtcg tgagggttca agtccctcta
601 tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.73e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
605 |
586 |
2.73e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.