Match details
Record ID: |
JQ280535.1 |
Database: |
nt |
Go to original record |
Description: |
Cloning vector pBGEN02-hpt, complete sequence. |
Taxon: |
Cloning vector pBGEN02-hpt |
Original size: |
9621 bp |
View other 12 matches for this record
View other 10854 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
1 |
1 |
8714 |
8908 |
+ |
195 bp |
|
1 gcttctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagat
51 gcctctaccg acagtggtcc caaagatgga cccccaccca cgaggaacat
101 cgtggaaaaa gaagacgttc caaccacgtc ttcaaagcaa gtggattgat
151 gagatatctc cactgacgta agggatgacg cacaatccca ctatg
View other 7 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
94.7 |
19 bp |
1 |
0 |
1 |
19 |
1.44e-06 |
primerB |
100.0 |
19 bp |
0 |
0 |
194 |
176 |
3.34e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.