| Record ID: | X65195.2 | |
| Database: | nt | Go to original record |
| Description: | Streptomyces viridochromogenes strain Tue494 phosphinothricin tripeptide biosynthetic gene cluster: ORFB1, ORFB2, ORF1, phsB gene, ORFM, phsC gene, pmi gene, adhP gene, ORF3, pgdP gene, ppm gene, ppd gene, ORFx, pgmP gene, cpps gene, cppm gene, aldP gene, pmet gene, pms gene, phsA gene, pat gene, dea gene, the1 gene, the2 gene, trs gene, prpA gene, ORFE1, ORFE2 and ORFE3 (partial) | |
| Taxon: | Streptomyces viridochromogenes | |
| Original size: | 37823 bp | |
View other 1 match for this record
| Method: | QL-ELE-00-014 | Go to GMOMETHODS record |
| View in JRC GMO-Matrix | ||
| Description: | Qualitative PCR method for detection of phosphinothricin N-acetyltransferase gene (Grohmann et al., 2009). | |
| Target: | bar | |
View other 2622 matches for this method
| Predicted amplification details: | ||||||||||||||
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| Amplicon: | 60 bp |
1 acgagcacgg tcaacttccg tacggagccg cagactccgc aggagtggat 51 cgacgacctg
View other 43 matches with an identical amplicon
| Primers alignment: | ||
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Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.