Match details
Record ID: |
X02606.1 |
Database: |
nt |
Go to original record |
Description: |
Cauliflower mosaic virus (CM4184) R, U5 and flanking regions |
Taxon: |
Cauliflower mosaic virus |
Original size: |
2539 bp |
View other 6 matches for this record
View other 7896 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
318 |
393 |
+ |
76 bp |
|
1 aaagcaagtg gattgatgtg atatctccac tgacgtaagg gaatgacgca
51 caatcccact atccttcgca agaccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
23 bp |
0 |
0 |
1 |
23 |
9.63e-11 |
primerB |
100.0 |
20 bp |
0 |
0 |
76 |
57 |
3.73e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.