Match details
Record ID: |
AB609715.1 |
Database: |
nt |
Go to original record |
Description: |
Tol2 transposon-based gene trap vector pT2F2-SAhygpA-NP21 DNA, complete sequence. |
Taxon: |
Tol2 transposon-based gene trap vector pT2F2-SAhygpA-NP21 |
Original size: |
8148 bp |
View other 1 match for this record
View other 59426 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
3097 |
3311 |
- |
215 bp |
|
1 ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51 cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101 acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151 aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201 gccaggctca aggcg
View other 57490 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
3.06e-09 |
primerB |
100.0 |
21 bp |
0 |
0 |
215 |
195 |
3.06e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.