Match details
Record ID: |
GU445342.1 |
Database: |
nt |
Go to original record |
Description: |
Aristolochia kaempferi voucher H. Muroi #158 tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Aristolochia kaempferi |
Original size: |
957 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
529 |
+ |
529 bp |
|
1 cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51 acctactaag tggtaacttc caaattcaga gaaaccctgg aattgaaaat
101 gggcaatcct gagccaaatc ctgttttcag aaaaaaaaaa ggataggtgc
151 agagactcaa cggaagctgt tctaacgaat ggggttgact ttactacatt
201 ggtagaagaa tccttctatc gaaactccag agtgggatga ccctacgtat
251 gtacgtatac gtactgaaat atcaaagatt aatcacgacc cgaatccata
301 tttttttttc taaaaatttc agaagcagaa ggaagaatcg aatagtcagt
351 gatcaaatcg actatcacac cagagtctga tagatctttt taaggattga
401 ttaatcgagt gagacgagaa taaagataga gtcccattct acatgtcaat
451 actgacaaca atgaaattta tagtaagagg aaaatccgtc gactttagaa
501 atcgtgaggg ttcaagtccc tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.38e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
529 |
510 |
2.38e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.