Match details
Record ID: |
GU594550.1 |
Database: |
nt |
Go to original record |
Description: |
Moorochloa eruciformis tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Moorochloa eruciformis |
Original size: |
928 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
2 |
621 |
+ |
620 bp |
|
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101 gggcaatcct gagccaaatc ccttttttga aaaaacaagt ggttctcaaa
151 ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201 taacgaatcg aagtaattac gttgtgttgg tagtggaact ccctcgaaat
251 tatagaaaga agggctttat acatctaata cacacgtata agatactgac
301 atagcaaacg attaatcacg gaacccatat aataatatag gttctttatt
351 ttatattttt tttttagaat gaaattagga atgattatga aatagaaaat
401 tctgaatttt ttgagaatta ttttgaatcc attccaatcg aatattgagt
451 aatcaaatcc ttcaattcat tgttttgaga tatttaaaaa agtggattaa
501 tcgaacgagg ataaagagag agtcccattc tacatgtcaa tactgacaac
551 aatgaaattt ctagtaaaag gaaaatccgt cgactttata agtcgtgagg
601 gttcaagtcc ctctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.79e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
620 |
601 |
2.79e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.