Match details
Record ID: |
FJ801146.1 |
Database: |
nt |
Go to original record |
Description: |
Tylosema argentea voucher Alstrup 35 (K) tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; plastid. |
Taxon: |
Tylosema argentea |
Original size: |
1064 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
587 |
+ |
587 bp |
|
1 cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51 acctaccaag tgagaacttt caaattcaga gaaaccctgg aattaacaat
101 gggcaatcct gagccaaatc ctgttttccg aaaacaaaga agagttcaaa
151 aagttagaat aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa
201 caaatggagt tgacgggatt tcgtttcgtt agtaaagtaa tccttccatc
251 gaaactccag aaaagaaagg atcaaggata aacgtatata tacgtatcga
301 aatactatct caactaaatt aatgacgacg ccgaatctct atttttgaat
351 atttctataa taaatgaaag atgtaaatgg attcaaagtt gaggaaaaag
401 tcgaatattc attcatcaaa tcattcactc catcataatc cgatagatct
451 tttgaggaac tgattaatcg gacaagaata aagatagagt cccattctac
501 atgtcaatac tgacaacaat gaaatttata gtaagaggaa aatccgtcga
551 ctttcgaaat cgtgagggtt caagtccctc tatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.64e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
587 |
568 |
2.64e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.