Match details
Record ID: |
FJ801052.1 |
Database: |
nt |
Go to original record |
Description: |
Bauhinia bohniana voucher Douglas 766 (MEL) tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; plastid. |
Taxon: |
Bauhinia bohniana |
Original size: |
1060 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
596 |
+ |
596 bp |
|
1 cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51 acctaccaag tgagaatttt caaattcaga gaaaccctgg aattaacaat
101 gggcaatcct gagccaaatc ctgttttccg aaaacaaaga agagttcaaa
151 aagtgagaat aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa
201 caaatggagt tgacgggatt tcgtttcatt agtaaagtaa tccttctatc
251 gaaactccag aaaagaaagg atcaaagata aacgtatata tacgtatacg
301 taccgaaata ctatctcaac taaattaatg acgacgccga atctctattt
351 tttttgaatt tttatataag aaatgaaaga tgtaaatcga ttcaaagttg
401 aggaaagagt caaatattca ttcatcaaat cattcactcc atcataatcc
451 gatagatctt ttgaagaacc gattaatcgg acaagaataa agatagagtc
501 ccattctaca tgtcaatgct gacaacaatg aaatttatag taagaggaaa
551 atccgtcgac tttaaaaatc gtgagggttc aagtccctct atcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.68e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
596 |
577 |
2.68e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.