Match details
Record ID: |
AJ307309.1 |
Database: |
nt |
Go to original record |
Description: |
Moraea ventricosa chloroplast partial trnL-trnF intergenic spacer, specimen voucher Lovett 4621 MO |
Taxon: |
Moraea ventricosa |
Original size: |
1015 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
584 |
+ |
584 bp |
|
1 cgaaatcggt agacgctacg gacttgattg aactgagcct tagtatggaa
51 acctgctaag tggtaacttc caaattcaga gaaacccggg aaaaaaaagg
101 ggcaatcctg agccaaatct ttattttgag aaaacaaaca aggttttaaa
151 aactagaata aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa
201 cgaatggggt tgactacgtt acgttggtag cgagaatcct tctatcgaaa
251 ttaaagaaag gatgatccta tatatctaat acatagtacg tatacatact
301 aacatatcaa acgattaatt acgacctgaa tctattatat atttattata
351 tatgcaaaat tcagagctat tgtggatcta ttccaatcga agttgaagga
401 agaatcgatc ggtgatcaaa tcattcattc cagagtttga tagatctttt
451 gaaaaacgaa ttaatcggaa gagaataaag agagagtccc gttctacatg
501 tcaataccga cagcaatgaa atttatagta aaaggaaaat ccgtcgactt
551 tagaaatcgt gagggttcaa gtccctctat cccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.63e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
584 |
565 |
2.63e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.