Match details
Record ID: |
AJ307260.1 |
Database: |
nt |
Go to original record |
Description: |
Moraea flaccida chloroplast partial trnL-trnF intergenic spacer, specimen voucher Goldblatt s.n. MO |
Taxon: |
Moraea flaccida |
Original size: |
980 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
566 |
+ |
566 bp |
|
1 cgaaatcggt agacgctacg gacttgattg aattgagcct tagtatggaa
51 acctgctaag tggtaacttc caaattcaga gaaacccggg aaaaaaaagg
101 ggcaatcctg agccaaatct ttattttgag aaaacaaaca agggttttaa
151 aaactagaat aaaaaaggat aggtgcagag actcaatgga agctgttcta
201 acgaatggag ttgactacgt tacgttggta gtgagaatcc ttctatcgaa
251 attaaagaaa ggatgatcct atatatctaa tacgtagtac gtatacatac
301 taacatatca aacgattaat tacgacctga atctattata tatttattat
351 atatgcaaaa ttcagagcta ttgtggatct attccaatcg aagttgaagg
401 aagaatcgat cggtgatcaa atcattcatt ccagagtttg atagatcttt
451 tgaaaaacga attaatcgga agagaataaa gagagagtcc cgttctacat
501 gtcaataccg acagcaatga aatttatagt aaaaggaaaa tccgtggttc
551 aagtccctct atcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.55e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
566 |
547 |
2.55e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.