Match details
Record ID: |
FN377812.1 |
Database: |
nt |
Go to original record |
Description: |
Cloning vector pKIGW containing genes for GUS, LhGR, nptII and ccdB |
Taxon: |
Cloning vector pKIGW |
Original size: |
19554 bp |
View other 16 matches for this record
View other 10854 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
1 |
0 |
6352 |
6547 |
- |
196 bp |
|
1 gcttctacaa atgccatcat tgcgataaag gaaaggctat cgttcaagaa
51 tgcctctacc gacagtggtc ccaaagatgg acccccaccc acgaggaaca
101 tcgtggaaaa agaagacgtt ccaaccacgt cttcaaagca agtggattga
151 tgtgatatct ccactgacgt aagggatgac gcacaatccc actatc
View other 185 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
94.7 |
19 bp |
1 |
0 |
1 |
19 |
1.45e-06 |
primerB |
100.0 |
20 bp |
0 |
0 |
196 |
177 |
9.33e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.