Match details
Record ID: |
EF367828.1 |
Database: |
nt |
Go to original record |
Description: |
Lepidium montanum voucher LEMO_06A tRNA-Leu (trnL) gene, partial sequence; chloroplast. |
Taxon: |
Lepidium montanum |
Original size: |
594 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
594 |
+ |
594 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccctgg aattaacaat
101 gggcaatcct gagccaaatc ctggtttacg cgaacaaacc ggagtttaga
151 aaacgagaaa aaagggatag gtgcagagac tcaatggaag ctgttctaac
201 aaatggagtt cactaccttg tgttgatatt gtgttgataa aggaatcctt
251 cgatcgaaac ttcaaatcaa aaaggatgaa ggagaaaaac ctatatttag
301 acaatatagg taacacaaaa gatctcaaaa atgacgacct gaatctcgat
351 ttctattttt ttataaacaa aataggaatg ttgtgaatca attcgaagtt
401 taagaaaaaa tcaactattc agtgatcaaa tgattcactg aatagtctga
451 tagatccttg gtggaactta ttaatcggac gagaataaag atagagtccc
501 attttacatg tcaatactga caacaatgaa atttatagta agatgaaaat
551 ccgttgactt ttaaaatcgt gagggttcaa gtccctctat cccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.68e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
594 |
575 |
2.68e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.