Match details
Record ID: |
MT261162.1 |
Database: |
nt |
Go to original record |
Description: |
Lilium formosanum plastid, complete genome. |
Taxon: |
Lilium formosanum |
Original size: |
152610 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
45177 |
45785 |
+ |
609 bp |
|
1 cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51 acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101 gggcaatcct gagccaaatc tttattttga gaaaaagggt ttaatttata
151 gtttttataa tataaaacta caataaaaaa aagataggtg cagagactca
201 atggaagctg ttctaacgaa tgaagttgat tacgttgcgc tggtagccgg
251 aattcttcta tcaaaatgac agagaggatg cccgccctat atacgtatat
301 atacatactg acatagtaaa cgattgatta atcgcggccc gaatccatta
351 taatatatat atatatgaaa aatttaagag ttattgtaaa tctattccat
401 attccaatca aagtttaagg aagaatcgaa tattcagtga tcaaattatt
451 cattccagag tctgtataga tcttttaaaa actgattatt cggacgagaa
501 taaagagaga gtcccattct acgtgtcaat accgacaaca atgaaattta
551 tagtaaaagg aaaatccgtc gactttataa gtcgtgaggg ttcaagtccc
601 tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.74e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
609 |
590 |
2.74e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.