Match details
Record ID: |
MK441679.1 |
Database: |
nt |
Go to original record |
Description: |
Hemiboea sp. ZH-2019 voucher Q. Zhang 380850 tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Hemiboea sp. ZH-2019 |
Original size: |
965 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
10 |
558 |
+ |
549 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgaagacttt cagagaaacc ccggaattaa gaaaaatggg
101 caatcctgag ccaaatcctg ttttctcaaa acaagggttc agagagcgaa
151 aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa caaatggagt
201 tgactgcgtt ggtagaggaa tcgttccatc gaaacttcag aaaggatgaa
251 ggataaacgt ctctattgaa tactatatca aatgatatat aatggcgcga
301 atctggggtt ttgtatatga aaaatagaag aattggtgtg aatttctttc
351 acattgataa aagaatcgaa tattcattga tcaaatcatt cactccatag
401 tccgatagat cttttaaaga acttcttaat cggacgaaaa taaagataga
451 gtcccgttct acatgtcaat accggcaaca atgaaacttc tagtaagagg
501 aaaatccgtc gacttttaaa atcgtgaggg ttcaagtccc tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.47e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
549 |
530 |
2.47e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.