Match details
Record ID: |
MH423071.1 |
Database: |
nt |
Go to original record |
Description: |
Podophyllum peltatum chloroplast, complete genome. |
Taxon: |
Podophyllum peltatum |
Original size: |
156871 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
49093 |
49631 |
+ |
539 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactgag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101 gggcaatcct gagccaaatc ctgttttcgg aaaagggata ggtgcagaga
151 ctcgatggaa gctgttctaa cgaatgaagt tggtcgaaaa aaatctttct
201 attaaaactc cagaaaggat gaacctatat atgatatata ggtatacgta
251 ctgaaataaa atagaaaaga ttaatgaaat acgaatcctt tatttaactt
301 atacaaaaat tgaaaaattc ttctgaatcg attccatgtg gaagtaagga
351 tcgaatattc actgatcaaa tcagccactt tagagtatag tatgatagat
401 tttgtgaaga actaactaat tggacgagaa taaagataga gtcccattct
451 acatgtcaat accgacaaca atgaaattta tagtaagagg aaaatccgtc
501 gactttagca atcgtgaggg ttcaagtccc tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.42e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
539 |
520 |
2.42e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.