Match details
Record ID: |
MH200606.1 |
Database: |
nt |
Go to original record |
Description: |
Binary vector pLX-CaMV, complete sequence. |
Taxon: |
Binary vector pLX-CaMV |
Original size: |
12857 bp |
View other 20 matches for this record
View other 10854 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
960 |
1153 |
+ |
194 bp |
|
1 gctcctacaa atgccatcat tgcgataaag gaaaggccat cgttgaagat
51 cctctgccga cagtggtccc aaagatggac ccccacccac gaggagcatc
101 gtggaaaaag aagacgttcc aaccacgtct tcaaagcaag tggattgatg
151 tgatatctcc actgacgtaa gggatgacgc acaatcccac tatc
View other 35 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
19 bp |
0 |
0 |
1 |
19 |
3.08e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
194 |
175 |
9.23e-09 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.