Match details
Record ID: |
EU220737.1 |
Database: |
nt |
Go to original record |
Description: |
Salvia miltiorrhiza from China tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Salvia miltiorrhiza |
Original size: |
889 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
530 |
+ |
530 bp |
|
1 cgaaatcggt agacgctacg gacttaaatt agattgagcc ttggtatgga
51 aacttactaa gtgataactt tcaaattcag agaaaccccg gaattaataa
101 aaatgggcaa tcctgagcca aatcctgttt tttcaaaaaa aaggataggt
151 gcagagactc aatggaagtt gttctaacaa atggagttga ctgcgccggt
201 agaggaatct ttccacggaa actttagaaa ggatgaagga taaacccatc
251 tattgaatac tatatcaaat gattaatgtt ggcccgaatc tgttttttta
301 atatgaaaat ggaaaaatcg atgtgaattt atttcacgtt gaagaataaa
351 tcgaatattc atcaactcat tcactccata gttcgataga tcttttaaag
401 aacttattaa tcggacgaga ataaagatag agtcccattc tacatgtcaa
451 taccggcaac aatgaaattt atagtaagag gaaaatccgt cgactttaaa
501 aatcgtgagg gttcaagtcc ctctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.38e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
530 |
511 |
2.38e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.