Match details
Record ID: |
EU220736.1 |
Database: |
nt |
Go to original record |
Description: |
Salvia miltiorrhiza from China tRNA-Leu (trnL) gene and trnL-trnF intergenic spacer, partial sequence; chloroplast. |
Taxon: |
Salvia miltiorrhiza |
Original size: |
894 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
531 |
+ |
531 bp |
|
1 cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51 acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctgtttt tttcaaaaaa aaaggatagg
151 tgcagagact caatggaagt tgttctaaca aatggagttg actgcgccgg
201 tagaggaatc tttccacgga aactttagaa aggatgaagg ataaacccat
251 ctattgaata ctatatcaaa tgattaatgt tggcccgaat ctgttttttt
301 aatatgaaaa tggaaaaatc gatgtgaatt tatttcacgt tgaagaataa
351 atcgaatatt catcaactca ttcactccat agttcgatag atcttttaaa
401 gaacttatta atcggacgag aataaagata gagtcccatt ctacatgtca
451 ataccggcaa caatgaaatt tatagtaaga ggaaaatccg tcgactttaa
501 aaatcgtgag ggttcaagtc cctctatccc c
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.39e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
531 |
512 |
2.39e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.