Match details
Record ID: |
MG831859.1 |
Database: |
nt |
Go to original record |
Description: |
Adenocalymma juliae chloroplast, partial genome. |
Taxon: |
Adenocalymma juliae |
Original size: |
152415 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
45156 |
45724 |
+ |
569 bp |
|
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101 aatgggcaat cctgagccaa atcctttttt ctcaaaacaa aggttcagaa
151 aaggaaaaaa aaggataggt gcagagactc aatggaagct gttctaacaa
201 atggagttgg ctgccttggt agaggaatct ttccatcgaa acttcagaaa
251 ggatgaagga taaacgtatc tattgaatac tatatcaata gattaatgat
301 agcctgaatc tgtatctgta tttttttttt tagtatatga aaaatggaag
351 aattagtgtg aattgattac acattgaaga aagaatcgaa tattcattca
401 tcaaatcatt cactccatag tccgatagtt cttttaaaga actgattaag
451 cggacgagaa taaagataga gtcccattct acatgtcaat accggcaaca
501 atgaaattta tagtaagagg aaaatccgtc gacttttaaa atcgtgaggg
551 ttcaagtccc tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.56e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
569 |
550 |
2.56e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.