Match details
Record ID: |
KY999948.1 |
Database: |
nt |
Go to original record |
Description: |
Festuca kryloviana isolate 66 tRNA-Leu (trnL) gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe (trnF) gene, partial sequence; chloroplast. |
Taxon: |
Festuca kryloviana |
Original size: |
1017 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
615 |
+ |
615 bp |
|
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagg aggttctcga
151 actagaatac aaaggaaaag gataggtgca gagactcaat ggaagctgtt
201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251 tttgagaaag aagggcttta tacacctaat aaacacgtat agatactgac
301 caaacgatta atcacggaac ccatattata atataggttc tttattcttt
351 tttagaatga aatttgaaat agaaatgatt atgaaataaa aaattctgaa
401 ttttttgtag aattatttgg aatccattcc aattgaatat ttagtaatca
451 aatccttcaa ttcaaagttt tgaggtcttt aaaacagtgg attaatcgga
501 cgaggacaaa gagagagtcc cattctacat gtcaatactg acaacaatga
551 aatttctagt aaaaggaaaa tccgtcgact ttataagtcg tgagggttca
601 agtccctcta tcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.77e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
615 |
596 |
2.77e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.