Match details
Record ID: |
KY999943.1 |
Database: |
nt |
Go to original record |
Description: |
Festuca sinensis isolate 8 tRNA-Leu (trnL) gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe (trnF) gene, partial sequence; chloroplast. |
Taxon: |
Festuca sinensis |
Original size: |
1025 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1 |
619 |
+ |
619 bp |
|
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa
101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagg aggttctcga
151 actagaatac aaaggaaaag gataggtgca gaggctcaat ggaagctgtt
201 ctaacgaatc gagttaatta cgttgtgttg ttagtggaat tccttctaaa
251 tttgagaaag aagggcttta tacacctaat aaacacgtat agatactgac
301 atagcaaacg attaatcacg gaacccatat tataatatag gttctttatt
351 cttttttaga atgaaatttg agatagaaat gattatgaaa taaaaaattc
401 agaatttttt gtagaattat ttggaatcca ttccaattga atatttagta
451 atcaaatcct tcaattcaaa gttttgaggt ctttaaaaca gtggattaat
501 cggacgagga caaagagaga gtcccattct acatgtcaat actgacaaca
551 atgaaatttc tagtaaaagg aaaatccgtc gactttataa gtcgtgaggg
601 ttcaagtccc tctatcccc
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.79e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
619 |
600 |
2.79e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.