Match details
Record ID: |
KY972701.1 |
Database: |
nt |
Go to original record |
Description: |
Anisoptera grossivenia isolate KASag1 tRNA-Thr (trnT) gene, partial sequence; trnT-trnL intergenic spacer, tRNA-Leu (trnL) gene, and trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe (trnF) gene, partial sequence; plastid. |
Taxon: |
Anisoptera grossivenia |
Original size: |
2079 bp |
View other 20492 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
1044 |
1629 |
+ |
586 bp |
|
1 cgaaatcggt agacgctacg gacttaattg tattgagcct tagtatggaa
51 acctactaag tgataacttt caaattcaga gaaaccctgg aaaaaaaaag
101 ggcaatcctg agccaaatcc tgtttaaaaa agcgttcaaa aagaaatagg
151 ataggtgcag agactcaatg gaagttgttc gaacaaatgg ggttgactgc
201 ttttgcgttg gtaaaagaat acttctatcg aaacttcagc aaggataaac
251 atatagaata cataatgaaa aaactatttc aaaagagacg actgggacac
301 ctattctttt gatttctatt tttttatagg ttatagcaaa aagaattata
351 tgaaaaatca aaagaatcgt tgtgaatcga tttcaaattg aagaaagaat
401 caaatagaat attcactaat caaacaattc actccatagt ctgataaatc
451 aatggattaa ttggacgaga ataaagatag agtcccattg tacatgtcaa
501 tatcaatacc gacaacaatg aaatttatag taagaggaaa atccgtcgac
551 tttaaaaatc gtgagggttc aagtccctct atcccc
View other 3 matches with an identical amplicon
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
20 bp |
0 |
0 |
1 |
20 |
2.64e-08 |
primerB |
100.0 |
20 bp |
0 |
0 |
586 |
567 |
2.64e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.