Match details
Record ID:
NRN_DL469834
Database:
nrnl1
Go to original record
Description:
REPRODUCTIVE ABLATION CONSTRUCTS. Sequence 20 from patent US 7453025. Sequence 20 from patent US 8034998. JP 2011101659-A/16: REPRODUCTIVE ABLATION CONSTRUCTS. Sequence 20 from Patent EP2322542.
Taxon:
unidentified
Original size:
8534 bp
Patents:
JP2008513029 (lens , espacenet )
US7453025 (lens , espacenet )
US2006085867 (lens , espacenet )
US8034998 (lens , espacenet )
JP2011101659 (lens , espacenet )
EP2322542 (lens , espacenet )
View other 15 matches for this record
View other 1572 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
2510
2672
+
163 bp
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atccaaataa
51 tctgcaccgg atctggatcg tttcgcatga ttgaacaaga tggattgcac
101 gcaggttctc cggccgcttg ggtggagagg ctattcggct atgactgggc
151 acaacagaca atc
View other 978 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
2.01e-10
primerB
100.0
22 bp
0
0
163
142
6.81e-10
probe
100.0
25 bp
0
0
140
116
1.74e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.