Match details
Record ID:
NRN_DL470956
Database:
nrnl1
Go to original record
Description:
COMPOSITIONS AND METHODS FOR MODULATING LIGNIN OF A PLANT. MODIFICATION OF PLANT LIGNIN CONTENT. Sequence 62 from patent US 7402428. Sequence 62 from patent US 7456338. Sequence 812 from patent US 7799906. Sequence 62 from patent US 7807880. Sequence 62 from patent US 8030545. JP 2011055839-A/62: MODIFICATION OF PLANT LIGNIN CONTENT.
Taxon:
unidentified
Original size:
11300 bp
Patents:
JP2008513030 (lens , espacenet )
JP2008513025 (lens , espacenet )
US7402428 (lens , espacenet )
US2006101535 (lens , espacenet )
US7456338 (lens , espacenet )
US2006130183 (lens , espacenet )
US7799906 (lens , espacenet )
US7807880 (lens , espacenet )
US8030545 (lens , espacenet )
JP2011055839 (lens , espacenet )
View other 15 matches for this record
View other 1572 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
5754
5916
-
163 bp
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atccaaataa
51 tctgcaccgg atctggatcg tttcgcatga ttgaacaaga tggattgcac
101 gcaggttctc cggccgcttg ggtggagagg ctattcggct atgactgggc
151 acaacagaca atc
View other 978 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
2.01e-10
primerB
100.0
22 bp
0
0
163
142
6.81e-10
probe
100.0
25 bp
0
0
140
116
1.74e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.