Match details
Record ID:
NRN_AR707144
Database:
nrnl1
Go to original record
Description:
Sequence 13 from patent US 6933146. Methods and means for producing efficient silencing construct using recombinational cloning. Sequence 13 from patent US 7732660. Sequence 13 from patent US 7846718.
Taxon:
unidentified
Original size:
18691 bp
Patents:
US6933146 (lens , espacenet )
US2003049835 (lens , espacenet )
JP2004516852 (lens , espacenet )
US7732660 (lens , espacenet )
US7846718 (lens , espacenet )
View other 15 matches for this record
View other 1572 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
392
561
+
170 bp
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atccaaataa
51 tctgcaatgg caattacctt atccgcaact tctttaccta tttccgcccg
101 gatccgggca ggttctccgg ccgcttgggt ggagaggcta ttcggctatg
151 actgggcaca acagacaatc
View other 96 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
2.10e-10
primerB
100.0
22 bp
0
0
170
149
7.11e-10
probe
100.0
25 bp
0
0
147
123
1.82e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.