Match details
Record ID:
NRN_CS179661
Database:
nrnl1
Go to original record
Description:
Sequence 2 from Patent WO2005095655. Sequence 15 from Patent WO2006110762. QUANTITATIVE ASSAY FOR DETECTION OF NEWLY SYNTHESIZED RNA IN A CELL-FREE SYSTEM AND IDENTIFICATION OF RNA SYNTHESIS INHIBITORS. A nucleic acid construct comprising genomic nucleic acid of genotype 2a Hepatitis C virus, and the nucleic acid construct-transferred cells. Sequence 1 from patent US 7935676. Sequence 2 from patent US 7985541.
Taxon:
unidentified
Original size:
8024 bp
Patents:
WO2005095655 (lens , espacenet )
WO2006110762 (lens , espacenet )
WO2006110762 (lens , espacenet )
JP2007530049 (lens , espacenet )
WO2004104198 (lens , espacenet )
US7935676 (lens , espacenet )
US7985541 (lens , espacenet )
View other 1 match for this record
View other 58813 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
697
869
+
173 bp
1 ggatctcctg tcatctcacc ttgctcctgc cgagaaagta tccatcatgg
51 ctgatgcaat gcggcggctg catacgcttg atccggctac ctgcccattc
101 gaccaccaag cgaaacatcg catcgagcga gcacgtactc ggatggaagc
151 cggtcttgtc gatcaggatg atc
View other 57974 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
16 bp
0
0
1
16
1.08e-06
primerB
100.0
16 bp
0
0
173
158
1.08e-06
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.