Match details
Record ID:
NRN_DI047733
Database:
nrnl1
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Description:
ORGAN PREFERENTIAL GENES IDENTIFIED BY T-DNA INSERTIONALMUTAGENESIS OF RICE. ORGAN PREFERENTIAL GENES IDENTIFIED BY T-DNA INSERTIONAL MUTAGENESIS OF RICE.
Taxon:
unidentified
Original size:
6282 bp
Patents:
JP2006507819 (lens , espacenet )
View other 5 matches for this record
View other 15508 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
2180
2297
+
118 bp
1 gcatgacgtt atttatgaga tgggttttta tgattagagt cccgcaatta
51 tacatttaat acgcgataga aaacaaaata tagcgcgcaa actaggataa
101 attatcgcgc gcggtgtc
View other 15178 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
24 bp
0
0
1
24
4.22e-11
primerB
100.0
24 bp
0
0
118
95
4.22e-11
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.