Match details
| Record ID: |
NRN_DD123308 |
| Database: |
nrnl1 |
Go to original record |
| Description: |
Plant Artificial Chromosomes, Uses thereof, and Methods of Preparing Plant Artificial Chromosomes. Plant Artificial Chromosomes, Uses thereof, and Methods of Preparing Plant Artificial Chromosomes. CHROMOSOME-BASED PLATFORMS. CHROMOSOME-BASED PLATFORMS. CHROMOSOME-BASED PLATFORMS. CHROMOSOME-BASED PLATFORMS. JP 2010529845-A/30: Protein Production in Plants. Sequence 104 from patent US 7521240. Sequence 107 from patent US 7521240. Sequence 2824 from Patent WO2009083958. Sequence 922 from Patent EP2154946. Sequence 34 from Patent EP2171068. Sequence 1651 from Patent EP2183371. JP 2009254382-A/15: Plant Artificial Chromosomes, Uses thereof, and Methods of Preparing Plant Artificial Chromosomes. JP 2009254382-A/17: Plant Artificial Chromosomes, Uses thereof, and Methods of Preparing Plant Artificial Chromosomes. |
| Taxon: |
unidentified |
| Original size: |
277 bp |
| Patents: |
JP2005500827 (lens, espacenet)
JP2005500827 (lens, espacenet)
JP2005503778 (lens, espacenet)
JP2005503778 (lens, espacenet)
JP2009017884 (lens, espacenet)
JP2009017884 (lens, espacenet)
JP2010529845 (lens, espacenet)
US7521240 (lens, espacenet)
US2005181506 (lens, espacenet)
US7521240 (lens, espacenet)
US2005181506 (lens, espacenet)
WO2009083958 (lens, espacenet)
EP2154946 (lens, espacenet)
EP2171068 (lens, espacenet)
EP2183371 (lens, espacenet)
JP2009254382 (lens, espacenet)
JP2009254382 (lens, espacenet)
|
View other 5 matches for this record
| Method: |
QL-ELE-00-013 |
Go to GMOMETHODS record |
|
View in JRC GMO-Matrix
|
|
| Description: | Qualitative duplex PCR method for detection of Cauliflower Mosaic Virus 35S promoter and nopaline synthase terminator (partim T-nos) (Waiblinger et al., 2008). |
| Target: | T-nos |
View other 15584 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
127 |
210 |
+ |
84 bp |
|
1 catgtaatgc atgacgttat ttatgagatg ggtttttatg attagagtcc
51 cgcaattata catttaatac gcgatagaaa acaa
View other 30799 matches with an identical amplicon
| Primers and probe alignment: |
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
25 bp |
0 |
0 |
1 |
25 |
9.20e-12 |
| primerB |
100.0 |
25 bp |
0 |
0 |
84 |
60 |
9.20e-12 |
| probe |
100.0 |
28 bp |
0 |
0 |
28 |
55 |
2.28e-13 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
