Match details
Record ID: |
NRN_DD123299 |
Database: |
nrnl1 |
Go to original record |
Description: |
Plant Artificial Chromosomes, Uses thereof, and Methods of Preparing Plant Artificial Chromosomes. CHROMOSOME-BASED PLATFORMS. CHROMOSOME-BASED PLATFORMS. Sequence 95 from patent US 7521240. JP 2009254382-A/6: Plant Artificial Chromosomes, Uses thereof, and Methods of Preparing Plant Artificial Chromosomes. |
Taxon: |
unidentified |
Original size: |
12592 bp |
Patents: |
JP2005500827 (lens, espacenet)
JP2005503778 (lens, espacenet)
JP2009017884 (lens, espacenet)
US7521240 (lens, espacenet)
US2005181506 (lens, espacenet)
JP2009254382 (lens, espacenet)
|
View other 30 matches for this record
View other 15625 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
6091 |
6172 |
+ |
82 bp |
|
1 gcctctgccg acagtggtcc caaagatgga cccccaccca cgaggagcat
51 cgtggaaaaa gaagacgttc caaccacgtc tt
View other 26489 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
18 bp |
0 |
0 |
1 |
18 |
4.54e-08 |
primerB |
100.0 |
22 bp |
0 |
0 |
82 |
61 |
3.55e-10 |
probe |
100.0 |
22 bp |
0 |
0 |
21 |
42 |
3.55e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.