Match details
| Record ID: |
NRN_CS007935 |
| Database: |
nrnl1 |
Go to original record |
| Description: |
Sequence 2 from Patent EP1502955. Sequence 2 from Patent WO2005014827. |
| Taxon: |
unidentified |
| Original size: |
11195 bp |
| Patents: |
EP1502955 (lens, espacenet)
WO2005014827 (lens, espacenet)
|
View other 10 matches for this record
| Method: |
QL-CON-00-005 |
Go to GMOMETHODS record |
|
View in JRC GMO-Matrix
|
|
| Description: | Qualitative PCR method for detection of the junction between the pat gene and the CaMV35S terminator (ISO/FDIS 21569:2005). |
| Target: | pat-CaMV T-35S |
View other 212 matches for this method
| Predicted amplification details: |
| Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
| 0 |
0 |
3480 |
3688 |
- |
209 bp |
|
1 atggtggatg gcatgatgtt ggtttttggc aaagggattt tgagttgcca
51 gctcctccaa ggccagttag gccagttacc cagatctgag tcgacctgca
101 ggcatgccgc tgaaatcacc agtctctctc tacaaatcta tctctctcta
151 taataatgtg tgagtagttc ccagataagg gaattagggt tcttataggg
201 tttcgctca
View other 31 matches with an identical amplicon
| Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
| primerA |
100.0 |
21 bp |
0 |
0 |
1 |
21 |
2.97e-09 |
| primerB |
100.0 |
23 bp |
0 |
0 |
209 |
187 |
2.60e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
