Match details
Record ID:
NRN_CS566035
Database:
nrnl1
Go to original record
Description:
Sequence 22 from Patent WO2006039376. Sequence 22 from patent US 7323556. CORN EVENT DAS-59122-7 AND METHODS FOR DETECTION THEREOF. Sequence 22 from patent US 7695914. Sequence 22 from patent US 7696341. Sequence 22 from patent US 7875429. Sequence 22 from patent US 7875430. Sequence 22 from patent US 7888023. Sequence 22 from patent US 7888495. Sequence 22 from patent US 7897342. Sequence 22 from patent US 7932033. Sequence 22 from patent US 7956246.
Taxon:
unidentified
Original size:
2987 bp
Patents:
WO2006039376 (lens , espacenet )
US7323556 (lens , espacenet )
US2006070139 (lens , espacenet )
JP2008514233 (lens , espacenet )
US7695914 (lens , espacenet )
US7696341 (lens , espacenet )
US7875429 (lens , espacenet )
US7875430 (lens , espacenet )
US7888023 (lens , espacenet )
US7888495 (lens , espacenet )
US7897342 (lens , espacenet )
US7932033 (lens , espacenet )
US7956246 (lens , espacenet )
View other 4 matches for this record
Method:
QL-CON-00-005
Go to GMOMETHODS record
View in JRC GMO-Matrix
Description: Qualitative PCR method for detection of the junction between the pat gene and the CaMV35S terminator (ISO/FDIS 21569:2005).
Target: pat-CaMV T-35S
View other 212 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
460
669
+
210 bp
1 atggtggatg gcatgatgtt ggtttttggc aaagggattt tgagttgcca
51 gctcctccaa ggccagttag gccagttacc cagatctgag tcgacctgca
101 ggcatgcccg ctgaaatcac cagtctctct ctacaaatct atctctctct
151 ataataatgt gtgagtagtt cccagataag ggaattaggg ttcttatagg
201 gtttcgctca
View other 140 matches with an identical amplicon
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
21 bp
0
0
1
21
2.98e-09
primerB
100.0
23 bp
0
0
210
188
2.61e-10
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.