Match details
Record ID: NRN_EA501372
Database:
nrnl1
Go to original record
Description:
Sequence 60 from patent US 7361813. Corn Event MIR604. Corn event MIR604. Sequence 60 from patent US 7897748. Sequence 46 from Patent EP2080805. Sequence 6 from Patent WO2009112508. Sequence 41 from Patent WO2009150170. Sequence 44 from Patent WO2010036946. Sequence 60 from Patent EP2281447. JP 2011516036-A/6: A method for the production of human recombinant lysosomal enzymes in a cereal endosperm. Sequence 60 from Patent EP2289311. Sequence 45 from Patent WO2011158242.
Taxon:
unidentified
Original size:
253 bp
Patents:
US7361813 (lens , espacenet )
US2005216970 (lens , espacenet )
JP2007530036 (lens , espacenet )
US7897748 (lens , espacenet )
EP2080805 (lens , espacenet )
WO2009112508 (lens , espacenet )
WO2009150170 (lens , espacenet )
WO2010036946 (lens , espacenet )
EP2281447 (lens , espacenet )
JP2011516036 (lens , espacenet )
EP2289311 (lens , espacenet )
WO2011158242 (lens , espacenet )
View other 5 matches for this record
Method: QL-ELE-00-013
Go to GMOMETHODS record
View in JRC GMO-Matrix
Description: Qualitative duplex PCR method for detection of Cauliflower Mosaic Virus 35S promoter and nopaline synthase terminator (partim T-nos) (Waiblinger et al., 2008).
Target: T-nos
View other 15584 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
111
194
+
84 bp
1 catgtaatgc atgacgttat ttatgagatg ggtttttatg attagagtcc
51 cgcaattata catttaatac gcgatagaaa acaa
View other 30799 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
25 bp
0
0
1
25
9.20e-12
primerB
100.0
25 bp
0
0
84
60
9.20e-12
probe
100.0
28 bp
0
0
28
55
2.28e-13
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
