Match details
Record ID: NRN_CQ945863
Database:
nrnl1
Go to original record
Description:
Sequence 25 from Patent WO2004099447. Sequence 25 from patent US 7288643. Corn Event TC1507 and Methods for Detection Thereof. Sequence 25 from patent US 7417132. Sequence 25 from patent US 7435807. Sequence 25 from patent US 7449564. Sequence 25 from patent US 7514544. Sequence 25 from patent US 7989607.
Taxon:
unidentified
Original size:
6186 bp
Patents:
WO2004099447 (lens , espacenet )
US7288643 (lens , espacenet )
US2005039226 (lens , espacenet )
JP2006525028 (lens , espacenet )
US7417132 (lens , espacenet )
US2008015346 (lens , espacenet )
US7435807 (lens , espacenet )
US7435807 (lens , espacenet )
US7449564 (lens , espacenet )
US2008132690 (lens , espacenet )
US7514544 (lens , espacenet )
US2008051569 (lens , espacenet )
US7989607 (lens , espacenet )
View other 12 matches for this record
View other 10904 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
5127
5205
+
79 bp
1 cgtcttcaaa gcaagtggat tgatgtgata tctccactga cgtaagggat
51 gacgcacaat cccactatcc ttcgcaaga
View other 6569 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
22 bp
0
0
1
22
3.41e-10
primerB
100.0
22 bp
0
0
79
58
3.41e-10
probe
100.0
26 bp
0
0
31
56
2.52e-12
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.
