Match details

Record ID: NRN_AX959598
Database: nrnl1 Go to original record
Description: Sequence 12 from Patent WO03100072. Sequence 4 from Patent WO2004050694. Sequence 7 from Patent WO2005059144. Sequence 5 from Patent WO2005059154. Sequence 5 from Patent WO2005059139. Sequence 24 from Patent WO2005059093. Sequence 5 from Patent WO2005121349. Sequence 13 from Patent WO2006069711. Sequence 63 from Patent WO2006069711. Sequence 13 from Patent EP1908841. Sequence 63 from Patent EP1908841. Sequence 24 from Patent EP1908842. Sequence 7 from Patent EP1918378. P EF-TU Expression units. PSOD EXPRESSION UNITS. METHODS FOR THE PREPARATION OF A FINE CHEMICAL BY FERMENTATION. METHODS FOR THE PREPARATION OF LYSINE BY FERMENTATION OF CORYNEBACTERIUM GLUTAMICUM. METHODS FOR THE PREPARATION OF A FINE CHEMICAL BY FERMENTATION. Verfahren zur fermentativen Herstellung schwefelhaltiger Feinchemikalien. Methods for the production of methionin. P EF-TU-Expressionseinheiten. METHODS FOR THE PREPARATION OF AFINE CHEMICAL BY FERMENTATION. Psod-Expressionseinheiten. METHODS FOR THE PREPARATION OF A. METHODS FOR THE PREPARATION OF A. Process for the fermentative production of sulfur-containing fine chemicals. Methods for the production of methionin. MULTIPLE PROMOTERS AND THE USE THEREOF FOR GENE EXPRESSION. MULTIPLE PROMOTERS AND THE USE THEREOF FOR GENE EXPRESSION. PSOD EXPRESSION UNITS. P EF-TU Expression units. METHODS FOR THE PREPARATION OF A FINE CHEMICAL BY FERMENTATION. Sequence 5 from Patent EP1939296. Sequence 12 from patent US 7635580. Sequence 24 from patent US 7785779. Sequence 4 from patent US 7892798. Sequence 13 from patent US 7968699. Sequence 63 from patent US 7968699. Sequence 24 from patent US 8044191. Sequence 5 from patent US 8048651. Sequence 7 from patent US 8071365. JP 2008212157-A/13: MULTIPLE PROMOTERS AND THE USE THEREOF FOR GENE EXPRESSION. JP 2008212157-A/63: MULTIPLE PROMOTERS AND THE USE THEREOF FOR GENE EXPRESSION.
Taxon: unidentified
Original size: 4323 bp
Patents: WO03100072 (lens, espacenet) WO2004050694 (lens, espacenet) WO2005059144 (lens, espacenet) WO2005059154 (lens, espacenet) WO2005059139 (lens, espacenet) WO2005059093 (lens, espacenet) WO2005121349 (lens, espacenet) WO2006069711 (lens, espacenet) WO2006069711 (lens, espacenet) EP1908841 (lens, espacenet) EP1908841 (lens, espacenet) EP1908842 (lens, espacenet) EP1918378 (lens, espacenet) JP2007514425 (lens, espacenet) JP2007514426 (lens, espacenet) JP2007514436 (lens, espacenet) JP2007514437 (lens, espacenet) JP2007514439 (lens, espacenet) JP2006521083 (lens, espacenet) JP2008523834 (lens, espacenet) JP2008523834 (lens, espacenet) JP2008212154 (lens, espacenet) JP2008212155 (lens, espacenet) JP2008259505 (lens, espacenet) EP1939296 (lens, espacenet) US7635580 (lens, espacenet) US7785779 (lens, espacenet) US7892798 (lens, espacenet) US7968699 (lens, espacenet) US7968699 (lens, espacenet) US8044191 (lens, espacenet) US8048651 (lens, espacenet) US8071365 (lens, espacenet) JP2008212157 (lens, espacenet) JP2008212157 (lens, espacenet)

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Method: QL-ELE-00-002 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Neomycin phosphotransferase II gene (ISO/FDIS 21569:2005).
Target:nptII

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Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 770 984 + 215 bp

Amplicon: 215 bp
1     ctcaccttgc tcctgccgag aaagtatcca tcatggctga tgcaatgcgg
51    cggctgcata cgcttgatcc ggctacctgc ccattcgacc accaagcgaa
101   acatcgcatc gagcgagcac gtactcggat ggaagccggt cttgtcgatc
151   aggatgatct ggacgaagag catcaggggc tcgcgccagc cgaactgttc
201   gccaggctca aggcg 

View other 57490 matches with an identical amplicon


Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 21 bp 0 0 1 21 3.06e-09
primerB 100.0 21 bp 0 0 215 195 3.06e-09


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.