Match details
Record ID: |
NRN_BD295561 |
Database: |
nrnl1 |
Go to original record |
Description: |
Nucleic acid fragment for competitive PCR, and kit and method for quantitative determination of recombinant gene. |
Taxon: |
unidentified |
Original size: |
402 bp |
Patents: |
WO03027283 (lens, espacenet)
|
View other 6 matches for this record
View other 26 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
261 |
402 |
+ |
142 bp |
|
1 cctttaggat ttcagcatca gtggctacag cgacgttcag aattccgtgt
51 aactgcatgc ttcacggtgc aagcagccgg cccgcaaccg cccgcaaatc
101 ctctggcctt tccggaaccg tccgcattcc cggcgacaag tc
View other 1 match with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
24 bp |
0 |
0 |
1 |
24 |
5.13e-11 |
primerB |
100.0 |
18 bp |
0 |
0 |
142 |
125 |
8.08e-08 |
probe |
100.0 |
19 bp |
0 |
0 |
83 |
101 |
2.42e-08 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.