Match details
Record ID: |
NRN_BD375402 |
Database: |
nrnl1 |
Go to original record |
Description: |
TRAIT-ASSOCIATED GENE IDENTIFICATION METHOD. |
Taxon: |
unidentified |
Original size: |
313 bp |
Patents: |
JP2003523724 (lens, espacenet)
|
View other 631 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
120 |
197 |
+ |
78 bp |
|
1 caaaataacg tggaaaagag ctgtcctgac agcccactca ctaatgcgta
51 tgacgaacgc agtgacgacc acaaaaga
View other 445 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
22 bp |
0 |
0 |
1 |
22 |
3.36e-10 |
primerB |
100.0 |
20 bp |
0 |
0 |
78 |
59 |
3.84e-09 |
probe |
100.0 |
22 bp |
0 |
0 |
26 |
47 |
3.36e-10 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.