Match details
Record ID:
NRN_CS029072
Database:
nrnl1
Go to original record
Description:
Sequence 145 from Patent WO2004113528. Sequence 145 from Patent WO2006060699. Sequence 145 from patent US 7358418. ISOFORMS OF EIF-5A:SENESCENCE-INDUCED EIF5A. WOUNDING-INDUCED EIF-5A;GROWTH EIF-5A;AND DHS. ISOFORMS OF EIF-5A: SENESCENCE-INDUCED EIF5A;WOUNDING-INDUCED EIF-5A; GROWTH EIF-5A; AND DHS. METHODS OF INCREASING SEED YIELD. Sequence 145 from patent US 7663028. Sequence 145 from patent US 8232455.
Taxon:
unidentified
Original size:
662 bp
Patents:
WO2004113528 (lens , espacenet )
WO2006060699 (lens , espacenet )
US7358418 (lens , espacenet )
US2005155110 (lens , espacenet )
JP2007524384 (lens , espacenet )
JP2008521445 (lens , espacenet )
US7663028 (lens , espacenet )
US8232455 (lens , espacenet )
View other 1054 matches for this method
Predicted amplification details:
Mismatches
Gaps
From
To
Strand
Amplicon size
0
0
170
257
+
88 bp
1 tttttattcg gttttcgcta tcgaactgtg caaatggaaa tggatggaga
51 agagttaatg aatgatatgg tccttttgtt cattctca
View other 10 matches with an identical amplicon
Primers and probe alignment:
Primer/Probe
% Identity
Length
Mismatches
Gaps
From
To
Score
primerA
100.0
23 bp
0
0
1
23
1.13e-10
primerB
100.0
26 bp
0
0
88
63
2.82e-12
probe
97.3
37 bp
0
1
61
25
5.12e-16
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.