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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Match details

Record ID: NRN_CS029014
Database: nrnl1 Go to original record
Description: Sequence 87 from Patent WO2004113528. Sequence 135 from Patent WO2004113528. Sequence 139 from Patent WO2004113528. Sequence 143 from Patent WO2004113528. Sequence 148 from Patent WO2004113528. Sequence 153 from Patent WO2004113528. Sequence 87 from Patent WO2006060699. Sequence 135 from Patent WO2006060699. Sequence 139 from Patent WO2006060699. Sequence 143 from Patent WO2006060699. Sequence 148 from Patent WO2006060699. Sequence 153 from Patent WO2006060699. Sequence 207 from Patent WO2006060699. Sequence 87 from patent US 7358418. Sequence 135 from patent US 7358418. Sequence 139 from patent US 7358418. Sequence 143 from patent US 7358418. Sequence 148 from patent US 7358418. Sequence 153 from patent US 7358418. ISOFORMS OF EIF-5A:SENESCENCE-INDUCED EIF5A. WOUNDING-INDUCED EIF-5A;GROWTH EIF-5A;AND DHS. ISOFORMS OF EIF-5A:SENESCENCE-INDUCED EIF5A. WOUNDING-INDUCED EIF-5A;GROWTH EIF-5A;AND DHS. ISOFORMS OF EIF-5A:SENESCENCE-INDUCED EIF5A. WOUNDING-INDUCED EIF-5A;GROWTH EIF-5A;AND DHS. ISOFORMS OF EIF-5A:SENESCENCE-INDUCED EIF5A. WOUNDING-INDUCED EIF-5A;GROWTH EIF-5A;AND DHS. ISOFORMS OF EIF-5A:SENESCENCE-INDUCED EIF5A. WOUNDING-INDUCED EIF-5A;GROWTH EIF-5A;AND DHS. ISOFORMS OF EIF-5A:SENESCENCE-INDUCED EIF5A. WOUNDING-INDUCED EIF-5A;GROWTH EIF-5A;AND DHS. ISOFORMS OF EIF-5A: SENESCENCE-INDUCED EIF5A;WOUNDING-INDUCED EIF-5A; GROWTH EIF-5A; AND DHS. ISOFORMS OF EIF-5A: SENESCENCE-INDUCED EIF5A;WOUNDING-INDUCED EIF-5A; GROWTH EIF-5A; AND DHS. ISOFORMS OF EIF-5A: SENESCENCE-INDUCED EIF5A;WOUNDING-INDUCED EIF-5A; GROWTH EIF-5A; AND DHS. ISOFORMS OF EIF-5A: SENESCENCE-INDUCED EIF5A;WOUNDING-INDUCED EIF-5A; GROWTH EIF-5A; AND DHS. ISOFORMS OF EIF-5A: SENESCENCE-INDUCED EIF5A;WOUNDING-INDUCED EIF-5A; GROWTH EIF-5A; AND DHS. ISOFORMS OF EIF-5A: SENESCENCE-INDUCED EIF5A;WOUNDING-INDUCED EIF-5A; GROWTH EIF-5A; AND DHS. METHODS OF INCREASING SEED YIELD. METHODS OF INCREASING SEED YIELD. METHODS OF INCREASING SEED YIELD. METHODS OF INCREASING SEED YIELD. METHODS OF INCREASING SEED YIELD. METHODS OF INCREASING SEED YIELD. Sequence 87 from patent US 7663028. Sequence 135 from patent US 7663028. Sequence 139 from patent US 7663028. Sequence 143 from patent US 7663028. Sequence 148 from patent US 7663028. Sequence 153 from patent US 7663028. Sequence 207 from patent US 7663028. Sequence 87 from patent US 8232455. Sequence 135 from patent US 8232455. Sequence 139 from patent US 8232455. Sequence 143 from patent US 8232455. Sequence 148 from patent US 8232455. Sequence 153 from patent US 8232455.
Taxon: unidentified
Original size: 906 bp
Patents: WO2004113528 (lens, espacenet) WO2004113528 (lens, espacenet) WO2004113528 (lens, espacenet) WO2004113528 (lens, espacenet) WO2004113528 (lens, espacenet) WO2004113528 (lens, espacenet) WO2006060699 (lens, espacenet) WO2006060699 (lens, espacenet) WO2006060699 (lens, espacenet) WO2006060699 (lens, espacenet) WO2006060699 (lens, espacenet) WO2006060699 (lens, espacenet) WO2006060699 (lens, espacenet) US7358418 (lens, espacenet) US2005155110 (lens, espacenet) US7358418 (lens, espacenet) US2005155110 (lens, espacenet) US7358418 (lens, espacenet) US2005155110 (lens, espacenet) US7358418 (lens, espacenet) US2005155110 (lens, espacenet) US7358418 (lens, espacenet) US2005155110 (lens, espacenet) US7358418 (lens, espacenet) US2005155110 (lens, espacenet) JP2007524384 (lens, espacenet) JP2007524384 (lens, espacenet) JP2007524384 (lens, espacenet) JP2007524384 (lens, espacenet) JP2007524384 (lens, espacenet) JP2007524384 (lens, espacenet) JP2008521445 (lens, espacenet) JP2008521445 (lens, espacenet) JP2008521445 (lens, espacenet) JP2008521445 (lens, espacenet) JP2008521445 (lens, espacenet) JP2008521445 (lens, espacenet) US7663028 (lens, espacenet) US7663028 (lens, espacenet) US7663028 (lens, espacenet) US7663028 (lens, espacenet) US7663028 (lens, espacenet) US7663028 (lens, espacenet) US7663028 (lens, espacenet) US8232455 (lens, espacenet) US8232455 (lens, espacenet) US8232455 (lens, espacenet) US8232455 (lens, espacenet) US8232455 (lens, espacenet) US8232455 (lens, espacenet)

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Method: QL-ELE-00-017 Go to GMOMETHODS record
View in JRC GMO-Matrix
Description:Qualitative PCR method for detection of Cauliflower Mosaic Virus 35S promoter (Barbau-Piednoir et al., 2014).
Target:CaMV P-35S

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Predicted amplification details:
Mismatches Gaps From To Strand Amplicon size
0 0 757 831 + 75 bp
Amplicon: 75 bp 
1     aaagcaagtg gattgatgtg atatctccac tgacgtaagg gatgacgcac
51    aatcccacta tccttcgcaa gaccc

View other 5753 matches with an identical amplicon

Primers alignment:
Primer/Probe % Identity Length Mismatches Gaps From To Score
primerA 100.0 23 bp 0 0 1 23 9.50e-11
primerB 100.0 20 bp 0 0 75 56 3.68e-09

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.