Match details
Record ID: |
NRN_FB702577 |
Database: |
nrnl1 |
Go to original record |
Description: |
Sequence 6 from Patent EP1882742. Plants defective for Soluble Starch Synthase IV (SSIV), methods for obtaining the same, and uses thereof. |
Taxon: |
unidentified |
Original size: |
11465 bp |
Patents: |
EP1882742 (lens, espacenet)
JP2009544299 (lens, espacenet)
|
View other 20 matches for this record
View other 1572 matches for this method
Predicted amplification details: |
Mismatches |
Gaps |
From |
To |
Strand |
Amplicon size |
0 |
0 |
2761 |
2912 |
+ |
152 bp |
|
1 ttcccctcgg tatccaatta gagtctcata ttcactctca atcaaagatc
51 cggcccatga tcatgtggat tgaacaagat ggattgcacg caggttctcc
101 ggccgcttgg gtggagaggc tattcggcta tgactgggca caacagacaa
151 tc
View other 32 matches with an identical amplicon
Primers and probe alignment: |
Primer/Probe |
% Identity |
Length |
Mismatches |
Gaps |
From |
To |
Score |
primerA |
100.0 |
23 bp |
0 |
0 |
1 |
23 |
1.87e-10 |
primerB |
100.0 |
22 bp |
0 |
0 |
152 |
131 |
6.33e-10 |
probe |
100.0 |
25 bp |
0 |
0 |
129 |
105 |
1.62e-11 |
|
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.